Vicent Moliner's picture
Principal Investigator
Research Group: RG9. Computational Biochemistry
Office: TC1219DD
Workphone: 964728084
E-mail: moliner@uji.es
Address:
Institute of Advanced Materials (INAM)
Universitat Jaume I
12006 Castelló
Spain
Researcher information:

Publications

2023

  1. Journal of Chemical Informatics and Modeling, 2023, 63, 1301-1312.

    Arafet, K.; Scalvini, L.; Galvani, F.; Martí, S.; Moliner, V.; Mor, M.; Lodola, A.

    Mechanistic Modeling of Lys745 Sulfonylation in EGFR C797S Reveals Chemical Determinants for Inhibitor Activity and Discriminates Reversible from Irreversible Agents.

  2. Journal of American Chemical Society, 2023, 145,

    Movilla, S.; Roca, M.; Moliner, V.; Magistrato, A.

    Molecular Basis of RNA-Driven ATP Hydrolysis in DExH-Box Helicases.

  3. ACS Catalysis, 2023, 13, 6289-6300.

    Arafet, K.; Royo, S.; Schirmeister, T.; Barthels, F.; González, F.V.; Moliner, V.

    Impact of the Recognition Part of Dipeptidyl Nitroalkene Compounds on the Inhibition Mechanism of Cysteine Proteases Cruzain and Cathepsin L.

  4. Nature Communications, 2023, 14, 3556.

    Świderek, K.; Velasco-Lozano, S.; Galmés, M.À.; Olazabal, I.; Sardon, H.; López-Gallego, F.; Moliner, V.

    Mechanistic studies of a lipase unveil effect of pH on hydrolysis products of small PET modules.

  5. ACS Catalysis, 2023, 13, 13354-13368.

    Fernández-de-la-Pradilla, A.; Royo, S.; Schirmeister, T.; Barthels, F.; Świderek, K.; González, F.V.; Moliner, V.

    Impact of the Warhead of Dipeptidyl Keto Michael Acceptors on the Inhibition Mechanism of Cysteine Protease Cathepsin L.

  6. Angewandte Chemie International Edition, 2023,

    de Santos, G.; González-Benjumea, A.; Fernandez-Garcia, A.; Aranda, C.; Wu, Y.; But, A.; Molina-Espeja, P.; Maté, M.; Gonzalez-Perez, D.; Zhang, W.; Kiebist, J.; Scheibner, K.; Hofrichter, M.; Świderek, K.; Moliner, V.; Sanz-Aparicio, J.; Hollmann, F.; Gutiérrez, A.; Alcalde, M.

    Engineering a Highly Regioselective Fungal Peroxygenase for the Synthesis of Hydroxy Fatty Acids.

  7. Journal of Chemical Informatics and Modeling, 2023,

    Movilla, S.; Martí, S.; Roca, M.; Moliner, V.

    Computational Study of the Inhibition of RgpB Gingipain, a Promising Target for the Treatment of Alzheimer’s Disease.

2022

  1. ACS Catalysis, 2022, 12, 698-708.

    Martí, S.; Arafet, K.; Lodola, A.; Mulholland, A.J.; Świderek, K.; Moliner, V.

    Impact of Warhead Modulations on the Covalent Inhibition of SARS-CoV-2 Mpro Explored by QM/MM Simulations.

  2. Int. J. Mol. Sci., 2022, 23, 300.

    Silva, J.R.A.; Urban, J.; Araújo, E.; Lameira, J.; Moliner, V.; Alves, C.N.

    Exploring the Catalytic Mechanism of the RNA Cap Modification by nsp16-nsp10 Complex of SARS-CoV-2 through a QM/MM Approach.

  3. Chemical Science, 2022, 13, 4779.

    Galmés, M.À.; Nödling, A.R.; He, K.; Luk, L.Y.P.; Świderek, K.; Moliner, V.

    Computational design of an amidase by combining the best electrostatic features of two promiscuous hydrolases.

  4. ACS Catalysis, 2022, 12, 14667–14678.

    Akintola, O.; Farren-Dai, M.; Ren, W.; Bhosale, S.; Britton, R.; Świderek, K.; Moliner, V.; Bennet, A.J.

    Glycoside Hydrolase Catalysis: Do Substrates and Mechanism-Based Covalent Inhibitors React via Matching Transition States?.

2021

  1. Top Catalysis, 2021, 1-12.

    Serrano-Aparicio, N.; Świderek, K.; Tuñón, I.; Moliner, V.; Bertran, J.

    Theoretical Studies of the Self Cleavage Pistol Ribozyme Mechanism.

  2. ACS Catalysis, 2021, 11, 10383-10393.

    Farren-Dai, M.; Sannikova, N.; Świderek, K.; Moliner, V.; Bennet, A.J.

    Fundamental Insight into Glycoside Hydrolase-Catalyzed Hydrolysis of the Universal Koshland Substrates–Glycopyranosyl Fluorides.

  3. Chemical Science, 2021, 12, 13686-13703.

    Chan, H.T.H.; Moesser, M.A.; Walters, R.K.; Malla, T.R.; Twidale, R.M.; John, T.; Deeks, H.M.; Johnston-Wood, T.; Mikhailov, V.; Sessions, R.B.; Dawsonl, W.; Saleh, E.; Lukacik, P.; Strain-Damerell, C.; Owen, C.D.; Nakajima, T.; Świderek, K.; Lodola, A.; Moliner, V.; Glowacki, D.R.; Spencer, J.; Walsh, M.A.A.; Schofield, .J.; Genovese, L.; Shoemark, D.K.; Mulholland, A.J.; Duarte, F.; Morris, G.M.

    Discovery of SARS-CoV-2 Mpro Peptide Inhibitors from Modelling Substrate and Ligand Binding.

  4. Journal of Chemical Informatics and Modeling, 2021, 61, 4582–4593.

    Movilla, S.; Martí, S.; Roca, M.; Moliner, V.

    Unrevealing the Proteolytic Activity of RgpB Gingipain from Computational Simulations.

  5. Org. Biomol. Chem., 2021, 19, 10424-10431.

    Nödling, A.R.; Santi, N.; Castillo, R.; Lipka-Lloyd, M.; Jin, Y.; Morrill, L.C.; Świderek, K.; Moliner, V.; Luk, L.Y.P.

    The role of streptavidin and its variants in catalysis by biotinylated secondary amines..

  6. Journal of Chemical Informatics and Modeling, 2021, 61, 3604–3614.

    Galmés, M.À.; Świderek, K.; Moliner, V.

    Computational Studies Suggest Promiscuous Candida antarctica Lipase B as an Environmentally Friendly Alternative for the Production of Epoxides.

  7. ACS Catalysis, 2021, 11, 8635–8644.

    Galmés, M.À.; Nödling, A.R.; Luk, L.; Świderek, K.; Moliner, V.

    Combined Theoretical and Experimental Study to Unravel the Differences in Promiscuous Amidase Activity of Two Nonhomologous Enzymes.

  8. Journal of Chemical Informatics and Modeling, 2021, 61, 3041–3051.

    Boneta, S.; Arafet, K.; Moliner, V.

    QM/MM Study of the Enzymatic Biodegradation Mechanism of Polyethylene Terephthalate.

    Article page: https://pubs.acs.org/doi/10.1021/acs.jcim.1c00394